Seasonal and age-associated pathogen distribution in newborn calves with diarrhea admitted to ICU

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dc.authorid0000-0003-0420-7714
dc.authorid0000-0002-0252-2377
dc.authorid0000-0002-4551-8749
dc.authorid0000-0002-9504-4350
dc.contributor.authorBerber, Engin
dc.contributor.authorÇanakoğlu, Nurettin
dc.contributor.authorSözdutmaz, İbrahim
dc.contributor.authorŞimsek, Emrah
dc.contributor.authorSürsal, Neslihan
dc.contributor.authorEkinci, Gencay
dc.contributor.authorKökkaya, Serkan
dc.contributor.authorArıkan, Ebru
dc.contributor.authorAmbarcıoğlu, Pınar
dc.contributor.authorGençay Göksu, Ayşe
dc.contributor.authorKeleş, İhsan
dc.date.accessioned2021-09-17T10:40:25Z
dc.date.available2021-09-17T10:40:25Z
dc.date.issued2021
dc.departmentVeteriner Fakültesi
dc.description*Sürsal, Neslihan ( Aksaray, Yazar )
dc.description.abstractCalf mortality constitutes a substantial loss for agriculture economy-based countries and is also a significant herd problem in developed countries. However, the occurrence and frequency of responsible gastro-intestinal (GI) pathogens in severe newborn diarrhea is still not well known. We aimed to determine the seasonal and age-associated pathogen distribution of severe diarrhea in newborn calves admitted to the intensive care unit (ICU) of Erciyes University animal hospital over a year. Fecal samples were collected during the ICU admissions, and specimens were subjected to a diarrheal pathogen screening panel that included bovine coronavirus (BCoV), Cryptosporidium spp., ETEC K99+, and bovine rotavirus, using RT-PCR and conventional PCR methods. Further isolation experiments were performed with permissive cell cultures and bacterial enrichment methods to identify the clinical importance of infectious pathogen shedding in the ICU. Among the hospitalized calves aged less than 45 days old, the majority of calves originated from small farms (85.9%). The pathogen that most frequently occurred was Cryptosporidium spp. (61.5%) followed by rotavirus (56.4%). The frequency of animal admission to ICU and GI pathogen identification was higher during the winter season (44.9%) when compared to other seasons. Most calves included in the study were 1-6 days old (44.9%). Lastly, co-infection with rotavirus and Cryptosporidium spp. occurred more frequently than other dual or multi-infection events. This study was the first to define severe diarrhea-causing GI pathogens from ICU admitted newborn calves in Turkey.
dc.identifier.doi10.3390/vetsci8070128
dc.identifier.endpage-en_US
dc.identifier.issue7en_US
dc.identifier.pmid34357920
dc.identifier.scopusqualityQ2
dc.identifier.startpage-en_US
dc.identifier.urihttps:/dx.doi.org/10.3390/vetsci8070128.
dc.identifier.urihttps://hdl.handle.net/20.500.12451/8547
dc.identifier.volume8en_US
dc.identifier.wosWOS:000677052000001
dc.identifier.wosqualityQ2
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherMDPI
dc.relation.ispartofVeterinary Sciences
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectAnimal Hospital
dc.subjectCoronavirus
dc.subjectEmergency Unit
dc.subjectIntensive Care Unit
dc.subjectNeonatal Calf Diarrhea
dc.subjectNewborn Calf Diarrhea
dc.subjectRotavirus
dc.titleSeasonal and age-associated pathogen distribution in newborn calves with diarrhea admitted to ICU
dc.typeArticle

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